施超

作者: 时间:2019-09-21 点击数:

https://hysw.qust.edu.cn/__local/7/A9/B3/EBFD62C7F4C77F26969EBC19159_5D9E5CF8_C92E8.png 

导师姓名:施

性别:男

职称:教授

学历(学位):博士

所属院系:海洋科学与生物工程学院

导师类别:硕士生导师

招生方向:植物学、动物学、生态学、基因组学、生物信息学、轻工技术与工程、           生物与医药

联系方式: chaoshi@qust.edu.cn

 

教育及工作经历:

20196月至今 青岛科技大学海洋科学与生物工程学院 教授

20161----20191  云南省热带作物科学研究所  特聘专家

20148----20195  中国科学院昆明植物研究所  助理研究员

20099----20147  中国科学院昆明植物研究所  博士

20059----20097  云南大学生命科学学院  学士


近期科研项目:

1. 禾本科C4植物起源与进化过程中的比较叶绿体基因组变异与基因趋同进化研究,国家自然科学基金项目,201801月至 2020 12月,27.0 万元。

2. 橡胶树基因组学与种质资源的发掘与利用研究,云南省科技创新专项,201401201701月,500.0 万元。

3. 基于琥珀化石与分子证据的鼠李科Phylica属起源演化研究,现代古生物学和地层学国家重点实验室开放课题(223123),202209月—202408月,7万。

 

近年以第一或通讯作者发表的论文:

论文(按时间倒序排列,#表示共同第一作者,*表示通讯作者)

1.        Peng Y, Jiang RX, Shi C, Long XX, Michael S. Engel, Wang S*, 2022. A New Subgenus and Species of Priochirus from Mid-Cretaceous Kachin Amber (Coleoptera: Staphylinidae: Osoriinae). Insects, 2022, 13(6): 513.

2.        Song WC, Chen ZM, Shi WB, Han WQ, Feng Q, Shi C*, Engel MS, Wang S*. Comparative Analysis of Complete Chloroplast Genomes of Nine Species of Litsea (Lauraceae): Hypervariable Regions, Positive Selection, and Phylogenetic Relationships. Genes, 2022, 13(9): 1550.

3.        Song WC, Chen ZM, Shi WB, Han WQ, Feng Q, Shi C*, Michael S. Engel, Wang S*, 2022. Comparative Chloroplast Genome Analysis of Wax Gourd (Benincasa hispida) with Three Benincaseae Species, Revealing Evolutionary Dynamic Patterns and Phylogenetic Implications. Genes, 2022, 13(3): 461.

4.        Shi WB, Song WC, Peng Y, Wang S*, Yang GW, Shi C*, 2022. The complete mitochondrial genome sequence and annotation of Tylopilus plumbeoviolaceoides TH Li, B. Song & YH Shen, 2002 (Boletaceae, Boletoideae). Mitochondrial DNA Part B, 2022, 7(6): 999-1000.

5.        Niu YF, Lu YJ, Song WC, He XY, Liu ZY, Zheng C, Wang S, Shi C*, Liu J*, 2022. Assembly and comparative analysis of the complete mitochondrial genome of three Macadamia species (M. integrifolia, M. ternifolia and M. tetraphylla). Plos One, 2022, 17(5): e0263545.

6.        Peng Y, Jiang RX, Shi C, Song WC, Long XX, Michael S. Engel, Wang S*, 2022. Alitrepaninae, a new subfamily of auger beetles from mid-Cretaceous Kachin amber of northern Myanmar (Coleoptera: Bostrichidae). Cretaceous Research, 2022, 137: 105244.

7.        Li Y, Wang YD*, Kathrin Feldberg, Wang S*, Shi C, Cui YM, Zhang XQ, 2022. New insights into the moss genus Vetiplanaxis with a description of V. obtusus sp. nov. from the mid-Cretaceous Kachin amber, Myanmar. Review of Palaeobotany and Palynology, 2022, 301: 104659.

8.        Chen ZM, He L, Song WC, Shi WB, Gong Q, Shi C*, 2022. Complete chloroplast genome sequence and annotation of Actinodaphne lecomtei CK Allen, 1938 (Lauraceae). Mitochondrial DNA Part B, 2022, 7(3): 548-549.

9.        Song WC, Chen ZM, He L, Feng Q, Zhang HR, Du GL, Shi C*, Wang S, 2022. Comparative Chloroplast Genome Analysis of Wax Gourd (Benincasa hispida) with Three Benincaseae Species, Revealing Evolutionary Dynamic Patterns and Phylogenetic Implications. Genes, 2022, 13(3): 461.

10.     Shi C, Wang S*, Cai HH, Zhang HR, Long XX, Tihelka E, Song WC, Feng Q, Jiang RX, Cai CY, Lombard N, Li X, Yuan J, Zhu JP, Yang HY, Liu XF, Xiang QP, Zhao ZT, Long CL, Schneider H, Zhang XC, Peng H, Li DZ, Fan Y, Engel MS, Wang YD, Spicer RA, 2022. Fire-prone Rhamnaceae with South African affinities in Cretaceous Myanmar amber. Nature Plants, 8(2), 125-135. (封面论文)

11.    Song WC, Ji CX, Chen ZM, Cai HH, Wu XM, Shi C, Wang S*, 2022. Comparative analysis the complete chloroplast genomes of nine Musa species: Genomic Features, Comparative Analysis and Phylogenetic Implications.  Frontiers in Plant Science, 13, 832884.

12.    Zhang HR, Shi C, Long XX, Feng Q, Cai HH, Lü YT, Wang S*, 2022. A new fossil record of Thyrsopteridaceae (Cyatheales) from the mid-Cretaceous amber of Myanmar. Palaeoworld, 31(3): 478-484.

13.     Wang S, Long XX, Zhang HR, Cai HH, Engel MS, Shi C*. 2021. A semi-aquatic fern (Marsileaceae) from the mid-Cretaceous amber of northern Myanmar. Cretaceous Research, 133, 105119.

14.    Jiang RX, Shi C, Zhang, HR, Cai HH, Long XX, Wang S* et al., 2021. Comment on "mother snail labors for posterity in bed of mid-cretaceous amber" by a. jochum, t. yu and t. a. neubauer. Gondwana Research, 97, 6872.

15.    Shi C, Cai HH, Jiang RX, Wang S* et al. 2021. Balance scientific and ethical concerns to achievea nuanced perspective on ‘blood amber.’ Nature Ecology & Evolution, 2021(5), 705-706.

16.    Song WC, Feng Q, Zhang X, Wu X, Shi C and Wang S*, 2021. The complete chloroplast genome sequence of Duranta erecta (Verbenaceae). Mitochondrial DNA Part B, 6(7), 1832-1833.

17.    Jiang RX, Song WC, Yang HY, Shi C, Wang S*, 2020. Discovery of the first Onthophilus species from mid-Cretaceous Burmese amber (Coleoptera: Histeridae). Cretaceous Research, 111, 104443.

18.    Zhang L, Huang YM, Wang M, Guo YF, Liang J, Yang XR, Qi WJ, Wu YJ, Si JL, Zhu SR, Li Z, Li RQ, Shi C*, et al. (2019). Development and genome sequencing of a laboratory-inbred miniature pig facilitates study of human diabetic disease. iScience, 19: 162–176.

19.    Liu J, Niu YF, Ni SB, He XY, Shi C*. 2017. Complete chloroplast genome of a subtropical fruit tree Macadamia ternifolia (Proteaceae). Mitochondrial DNA Part B Resources, 2(2), 738-739.

20.    Liu J, Shi C*. 2017. The complete chloroplast genome of wild shaddock, Citrus maxima (Burm.) Merr. Conservation Genetics Resources, 9(1): 1-3.

21.    Shi C, Wang S, Zhao F, Peng H, & Xiang CL. 2017. Full Chloroplast Genome Assembly of 11 Diverse Watermelon Accessions. Frontiers in Genetics, 8:46.

22.    Zhao QR, Liu ZW, Shi C, Peng H, Lu SG. 2017. Chloroplast genome sequence of an endangered non-photosynthetic mycoheterotrophic species Monotropastrum sciaphilum (Andres) G. D. Wallace. Conservation Genetics Resources, 7:1-3.

23.    Xia EH, Zhang HB, Sheng J, Li K, Zhang QJ, Kim C, Shi C, Jiang JJ, Mao SY, et al. 2017. The Tea Tree Genome Provides Insights into Tea Flavor and Independent Evolution of Caffeine Biosynthesis. Molecular Plant. 10: 866-877.

24.    Shi C, Xia EH, Jiang JJ, Zeng FC, Gao LZ. 2016. Full transcription of the chloroplast genome in photosynthetic eukaryotes. Scientific Reports, 6, 30135.

25.    Yin C, Shi C*. 2015. Mitochondrial genome of the neotropical Parnell's mustached bat Pteronotus parnellii (Pteronotus, Mormoopidae). Mitochondrial DNA, 26(6), 921-922.

26.    Zhang QJ#, Zhu T#, Xia EH#, Shi C# et al. 2014. Rapid diversification of five Oryza AA genomes associated with rice adaptation. PNAS, 111(46), 4954-4962.

27.    Huang H, Shi C, Liu Y, Mao SY, Gao LZ. 2014. Thirteen Camellia chloroplast genome sequences determined by high-throughput sequencing: genome structure and phylogenetic relationships. BMC Evolutionary Biology, 14(1), 151.

28.    Wu J, Kong X, Shi C, Gu Y, Jin C, Gao L, Jia J. 2013. Dynamic evolution of Rht-1 homologous regions in grass genomes. PLoS ONE, 8(9), e75544.

29.    Wang S#, Shi C#, Gao LZ. 2013. Plastid genome sequence of a wild woody oil species, Prinsepia utilis, provides insights into evolutionary and mutational patterns of Rosaceae chloroplast genomes. PLoS ONE, 8(9), e73946.

30.    Shi C, Liu Y, Huang H, Xia EH, Zhang HB, Gao LZ. 2013. Contradiction between plastid gene transcription and function due to complex posttranscriptional splicing: an exemplary study of ycf15 function and evolution in angiosperms. PLoS ONE, 8(3), e59620.

31.    Shi C, Hu N, Huang H, Gao J, Zhao YJ, Gao LZ. 2012. An improved chloroplast DNA extraction procedure for whole plastid genome sequencing. PLoS ONE, 7(2), e31468.

 

国际会议交流

Wang S, Shi C. Mid-Cretaceous Seed Plant Diversity in Burmese Amber. XIX IBC, 2017.(第十九届国际植物学大会,中国深圳)

Cai HH, Wang S, Shi C. Integrated Database of Biodiversity of Amber Fossils in Key Geological History Periods. IPC6. 2022, s34-13. (第六届国际古生物学大会,泰国孔敬)

Cai HH, Wang S, Shi C. Mid-Cretaceous Angiosperm Diversity in Burmese Amber. IPC6. 2022, s34-14. (第六届国际古生物学大会,泰国孔敬)

 

科普专刊

王硕, 施超, 姜日新, 殷晓峰, 蔡昊鸿, 龙晓璇, 宋维才, 吴晓萌等. 生命世界, 2022(387), 1, 1-41.

 

授权专利:

王硕, 蔡昊鸿, 施超. 一种用于琥珀定性分析的VR虚拟成像系统, ZL2022109148085, 发明.

蔡昊鸿, 王硕, 施超. 一种化石模型成像的轨道机构, ZL2022222989980.

蔡昊鸿, 王硕, 施超. 一种琥珀碎料的溶解再压设备, ZL2022221722296.

蔡昊鸿, 王硕, 施超. 一种琥珀碎料的熔结成型装置, ZL2022220032378.


教学情况及获奖:

1. 主讲本科生课程主讲本科生课程《生物信息学》。

2. 参与讲授研究生课程《科研能力培养与学术论文撰写》、《生物科学前沿讲座》。

3. 指导2021年第七届中国国际“互联网+”大学生创新创业大赛省级银奖。

4. 指导2022年第八届中国国际“互联网+”大学生创新创业大赛省级银奖。

5. 指导2022年第十三届山东省大学生创业计划大赛三等奖SDUC202213-3-0053

青岛科技大学海洋科学与生物工程学院    地址:山东省青岛市郑州路53号

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